The detailed information of tRNA gene sequence


Sequence ID>W1730028275
Genome IDMHAE01000156
Search identical group
Phylum/ClassIgnavibacteriota
SpeciesIgnavibacteria bacterium RBG_13_36_8 [MHAE]
Start position on genome 60420
End posion on genome 60327
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atattttgat
tRNA gene sequence 
TAGAGAGGATGGGACTGGTGTCTCGGCCGGTCTTCAAAACCGGTAGCCGGCGGATAAAAC
CGTCGGTGGCAGGTTCGATTCCTGCCCTCTCCGCtaa
Downstream region at tRNA end position 
acaaaaaaaa
Secondary structure (Cloverleaf model)
>W1730028275	SeC(p)	TCA
                   t      Ctaa acaaaaaaaa
                     T + G
                     A   C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T T
                    A     C G T C C     A
        T C        T      | | | | |     G
      G     A G G G       G C A G G     C
      G       + |                   T T
      T     C T C G
        G T        G     TAGCCGGCGGATAAAACCGTCGGTG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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