The detailed information of tRNA gene sequence


Sequence ID>W1730028963
Genome IDMIBI01000153
Search identical group
Phylum/ClassSpirochaetota
SpeciesSpirochaetes bacterium RBG_13_68_11 [MIBI]
Start position on genome 2411
End posion on genome 2501
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
catcgcgccG
tRNA gene sequence 
GAAGCTGATGAGATCTGGTGGTCTCCACGGTCTTCAAAACCGCTGGCTGCTAATGCTGCA
GCGGCAGGTTCGATTCCTGCCTCTTCCGCCt
Downstream region at tRNA end position 
taagaagcag
Secondary structure (Cloverleaf model)
>W1730028963	SeC(p)	TCA
                   G      GCCt taagaagcag
                     G - C
                     A   C
                     A - T
                     G + T
                     C   C
                     T   T
                     G - C          T T
                    A     C G T C C     A
      T C T        T      | | | | |     G
    G       A G A G       G C A G G     C
    G       | | | |                 T T
    T       T C T C
      G G          C     TGGCTGCTAATGCTGCAGCG
                    A   C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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