The detailed information of tRNA gene sequence


Sequence ID>W1730028968
Genome IDMIBK01000182
Search identical group
Phylum/ClassSpirochaetota
SpeciesSpirochaetes bacterium RBG_16_67_19 [MIBK]
Start position on genome 9536
End posion on genome 9627
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tcatcggggg
tRNA gene sequence 
CGGAAGCTGACGGGATCTGGTGGTCCCCGCGGTCTTCAAAACCGTCGGCCGCGCCAACGC
GCGGCGGCAGGTTCGATTCCTGCCTCTTCCGTaaa
Downstream region at tRNA end position 
atgagtgnnn
Secondary structure (Cloverleaf model)
>W1730028968	SeC(p)	TCA
                   g      Taaa atgagtgnnn
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C   T
                     T   C          T T
                    G     C G T C C     A
      C T A        A      | | | | |     G
    T       G G G C       G C A G G     C
    G       + | |                   T T
    G       T C C C
      T G G        C     CGGCCGCGCCAACGCGCGGCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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