The detailed information of tRNA gene sequence


Sequence ID>W1730028970
Genome IDMIBM01000247
Search identical group
Phylum/ClassSpirochaetota
SpeciesSpirochaetes bacterium RIFOXYC1_FULL_54_7 [MIBM]
Start position on genome 6419
End posion on genome 6509
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttttcccacc
tRNA gene sequence 
CGGAAGTTGATGGGGTCTGGTGGCTCCTGCGGTCTTCAAAACCGCTGGCCGTGTAATGCG
CGGCGGCAGGTTCGATTCCTGCCTCTTCCGAata
Downstream region at tRNA end position 
tggataatat
Secondary structure (Cloverleaf model)
>W1730028970	SeC(p)	TCA
                   c      Aata tggataatat
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T   T
                     T   C          T T
                    G     C G T C C     A
      C T G        A      | | | | |     G
    T       G G G T       G C A G G     C
    G       | + |                   T T
    G       C T C C
      T G G        T     TGGCCGTGTAATGCGCGGCG
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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