The detailed information of tRNA gene sequence


Sequence ID>W1730029036
Genome IDMIDQ01000384
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesVerrucomicrobia bacterium GWF2_62_7 [MIDQ]
Start position on genome 5568
End posion on genome 5663
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ggatggtttg
tRNA gene sequence 
cGGAAAGTGATGGGTGCCTGGTGGCCCCCGCGGTCTTCAAAACCGTCGTGGCTGGCGCAA
GCCGGCCAGGTAGGTTCGATTCCTGCCCTTTCCGCCAg
Downstream region at tRNA end position 
tttttttctc
Secondary structure (Cloverleaf model)
>W1730029036	SeC(p)	TCA
                   g      CCAg tttttttctc
                     c - G
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     G - C
                     T   C          T T
                    G     C G T C C     A
    C C G T        A      | + | | |     G
  T         G G G T       G T A G G     C
  G         | | |                   T T
  G         C C C C
    T G G          C     CGTGGCTGGCGCAAGCCGGCCAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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