The detailed information of tRNA gene sequence


Sequence ID>W1730031533
Genome IDMNIL01000010
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesVerrucomicrobia bacterium 13_1_20CM_4_54_11 [MNIL]
Start position on genome 2215
End posion on genome 2311
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position
ttttctctga
tRNA gene sequence
GGAGAGTGAAGGGTGCCTGGTGGTCCTCGCGGTCTTCAAAACCGTTGTCGGTTCCGCGTA
CCGGGACCGAGGTAGGTTCGATTCCTATCCTCTCCGCtt
Downstream region at tRNA end position
tttcagttgg
Secondary structure (Cloverleaf model)
>W1730031533	SeC(p)	TCA
                   a      GCtt tttcagttgg
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T   C          T T
                    G     T A T C C     A
    C C G T        A      + | | | |     G
  T         G G G A       G T A G G     C
  G         + | | |                 T T
  G         T C C T
    T G G          C     TGTCGGTTCCGCGTACCGGGACCGAG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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