The detailed information of tRNA gene sequence


Sequence ID>W1730034262
Genome IDMSIW01000012
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio cholerae [MSIW]
Start position on genome 155040
End posion on genome 154964
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
nnAAGTGAATAGCGCAGTTTGGTAGCGCATCTGGTTTGGGACCAGAGGGTCGGGGGTTCG
AATCCCTCTTCACCGACCA
Downstream region at tRNA end position 
ctcttcaaag
Secondary structure (Cloverleaf model)
>W1730034262	Pro	TGG
                   n      ACCA ctcttcaaag
                     n   G
                     n   C
                     A   C
                     A   A
                     G - C
                     T   T
                     G + T          T A
                    A     C T C C C     A
    G A C G        A      | + | | |     G
  T         C G A T       G G G G G     C
  T         | |                     T T
  T         G C G C
    G G T A        A     GGGTC
                    T - A
                    C - G
                    T - A
                    G - C
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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