The detailed information of tRNA gene sequence


Sequence ID>W1730036246
Genome IDMWQY01000004
Search identical group
Phylum/ClassSpirochaetota
SpeciesMarispirochaeta aestuarii sp. JC444 [MWQY]
Start position on genome 199288
End posion on genome 199199
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
aaaatctttt
tRNA gene sequence 
CGGAAGTTGATAAGATCTGGTGGTCTTCGCGGTCTTCAAAACCGTTGGGCGTGTAGAAGC
GTCGGGAGGTTCGATTCCTCCCTCTTCCGAaag
Downstream region at tRNA end position 
ggaatatgaa
Secondary structure (Cloverleaf model)
>W1730036246	SeC(p)	TCA
                   t      Aaag ggaatatgaa
                     C - G
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     T   T
                     T   C          T T
                    G     C C T C C     A
      C T A        A      | | | | |     G
    T       G A A T       G G A G G     C
    G       +   |                   T T
    G       T C T T
      T G G        C     TGGGCGTGTAGAAGCGTCG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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