The detailed information of tRNA gene sequence


Sequence ID>W1730041615
Genome IDNIDE01000011
Search identical group
Phylum/ClassPlanctomycetota
SpeciesFimbriiglobus ruber [NIDE]
Start position on genome 63579
End posion on genome 63674
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ggctcgattc
tRNA gene sequence 
GGGGGTGTTTGCACGGCTGGTGCCGGCCCTGGTCTTCAAAACCTGTGGGGGGTGTGAACA
ACGCCCCCAGTCGGTTCGATTCCGATACACTCCCGCtc
Downstream region at tRNA end position 
ggactccggc
Secondary structure (Cloverleaf model)
>W1730041615	SeC(p)	TCA
                   c      GCtc ggactccggc
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     G - C
                     T - A          T T
                    T     T A G C C     A
      C G G        T      + | | | |     G
    T       C A C G       G T C G G     C
    G           | |                 T T
    G       C G G C
      T G C        C     TGGGGGGTGTGAACAACGCCCCCA
                    C - G
                    T   T
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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