The detailed information of tRNA gene sequence


Sequence ID>W1730009302
Genome IDFOAB01000005
Search identical group
Phylum/ClassBacteroidota
SpeciesAquimarina amphilecti [FOAB]
Start position on genome 399635
End posion on genome 399559
Amino Acid Pseudo
Anticodon TTC
Upstream region at tRNA start position 
atatataaat
tRNA gene sequence 
GCTCTGTTCGTATAATGTTTTAGTACACCTCACTTTCTATGAGGAAACTAGGAGTTCGAT
TCTCCTACAGAGTACAA
Downstream region at tRNA end position 
ttttaataca
Secondary structure (Cloverleaf model)
>W1730009302	Pseudo	TTC
                   t      ACAA ttttaataca
                     G + T
                     C - G
                     T - A
                     C - G
                     T - A
                     G - C
                     T - A          T T
                    T     T C C T C     A
      T A A        C      | | | | |     G
    G       T A T G       A G G A G     C
    T       + | | |                 T T
    T       G T A C
      T T A        A     AAACT
                    C - G
                    C - G
                    T - A
                    C - G
                    A - T
                  C       A
                  T       T
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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