The detailed information of tRNA gene sequence


Sequence ID>W1730010426
Genome IDFRAK01000005
Search identical group
Phylum/ClassBacillota
SpeciesMegasphaera elsdenii [FRAK]
Start position on genome 52203
End posion on genome 52110
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tgtcagccat
tRNA gene sequence 
GGAAATGTGGCCGAGTTGGCTAAAGGCAGCTCTCCGCTAAGGAGCCGGACGAGGTGGTCT
CGTCCCGATGGTTCGAATCCATCCATTTCCGCCA
Downstream region at tRNA end position 
aaataaaaaa
Secondary structure (Cloverleaf model)
>W1730010426	Ser	GCT
                   t      GCCA aaataaaaaa
                     G - C
                     G - C
                     A - T
                     A - T
                     A - T
                     T - A
                     G - C          T A
                    T     C T A C C     A
    T T G A        G      | | | | |     G
  G         G C C G       G A T G G     C
  G           | | |                 T T
  C         A G G C
    T A A          A     CGGACGAGGTGGTCTCGTCCC
                    G - C
                    C - G
                    T - A
                    C - G
                    T + G
                  C       A
                  C       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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