The detailed information of tRNA gene sequence


Sequence ID>W1730028469
Genome IDMHMT01000027
Search identical group
Phylum/ClassUnclassified
SpeciesCandidatus Portnoybacteria bacterium RBG_13_40_8 [MHMT]
Start position on genome 5547
End posion on genome 5634
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
ttgtttaagg
tRNA gene sequence 
GGAAGCGTGCCAGAGTGGTTGAATGGGCTGGTCCTGAAAACCAGTAGGCCCGCAAGGGTC
TCAGAGGTTCGAATCCTCTCGCTTCCGCtc
Downstream region at tRNA end position 
taatctctaa
Secondary structure (Cloverleaf model)
>W1730028469	Ser	TGA
                   g      GCtc taatctctaa
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
      T G A        G      | | | | |     G
    G       G A C C       A G A G G     C
    G         | | |                 T T
    T       A T G G
      T G A        G     TAGGCCCGCAAGGGTCTC
                    C - G
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  C       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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