The detailed information of tRNA gene sequence


Sequence ID>W1730033203
Genome IDMPJW01000078
Search identical group
Phylum/ClassBacillota
SpeciesIleibacterium valens NYU-BL-A3 [MPJW]
Start position on genome 21318
End posion on genome 21405
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
agcgccattt
tRNA gene sequence 
GCAAAGTTGGCTGAGCGGACGAAAGCAACCGTTTGCTAAACGGTCGATCCATAAGGATCC
ACAGGTTCGAATTCTGTACTTTGCGCCA
Downstream region at tRNA end position 
attaattatt
Secondary structure (Cloverleaf model)
>W1730033203	Ser	GCT
                   t      GCCA attaattatt
                     G - C
                     C - G
                     A - T
                     A - T
                     A - T
                     G - C
                     T - A          T A
                    T     T G T C T     A
      C G A        G      | | | | +     G
    G       G T C G       A C A G G     C
    G         | | |                 T T
    A       A A G C
      C G A        A     CGATCCATAAGGATCC
                    A - T
                    C - G
                    C - G
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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