The detailed information of tRNA gene sequence


Sequence ID>W1710012528
Genome IDAOPF01000042
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesVibrio parahaemolyticus 12315 [AOPF]
Start position on genome 142631
End posion on genome 142715
Amino Acid Sup
Anticodon CTA
Upstream region at tRNA start position 
aaaacaccct
tRNA gene sequence 
GGAGGGGTTCCCGAGTGGCCAAAGGGAGCAGACTCTAAATCTGCCGGCTCCGCCTTCGAT
GGTTCGAATCCGTCCCCCTCCACCA
Downstream region at tRNA end position 
tattctttct
Secondary structure (Cloverleaf model)
>W1710012528	Sup	CTA
                   t      ACCA tattctttct
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     C T G C C     A
      T G A        T      | | + | |     G
    G       G C C C       G A T G G     C
    G         | | |                 T T
    C       A G G G
      C A A        A     CGGCTCCGCCTTC
                    G - C
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C T A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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