The detailed information of tRNA gene sequence


Sequence ID>W1710023861
Genome IDAVQK01000010
Search identical group
Phylum/ClassBacteroidota
SpeciesAquimarina longa SW024 [AVQK]
Start position on genome 42438
End posion on genome 42514
Amino Acid Cys
Anticodon GCA
Upstream region at tRNA start position 
gtataaagag
tRNA gene sequence 
GACAAGGTGGCTGAGTGGTTAAGGCTACAGATTGCAAATCTGTTTTTTTATGAGTTCGAA
TCTCATCCTTGTCTCTA
Downstream region at tRNA end position 
tgcttaatgc
Secondary structure (Cloverleaf model)
>W1710023861	Cys	GCA
                   g      TCTA tgcttaatgc
                     G - C
                     A - T
                     C - G
                     A - T
                     A - T
                     G - C
                     G - C          T A
                    T     T A C T C     A
      T G A        G      | | | | |     G
    G       G T C G       A T G A G     C
    G         + | |                 T T
    T       A G G C
      T A          T     TTTTTT
                    A - T
                    C - G
                    A - T
                    G - C
                    A - T
                  T       A
                  T       A
                    G C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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