The detailed information of tRNA gene sequence


Sequence ID>W1710034107
Genome IDAZFT01000053
Search identical group
Phylum/ClassBacillota
SpeciesLigilactobacillus apodemi DSM 16634 = JCM 16172 [AZFT]
Start position on genome 997911
End posion on genome 997822
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
aggcccataT
tRNA gene sequence 
GGAGAAGTACTCAAGTGGCTGAAGAGGCGCCCCTGCTAAGGGTGTAGGTCGGTAACACGG
CGCGAGGGTTCAAATCCCTCCTTCTCCGTtt
Downstream region at tRNA end position 
tatggcccgt
Secondary structure (Cloverleaf model)
>W1710034107	Ser	GCT
                   T      GTtt tatggcccgt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     A
    G       A C T C       G A G G G     C
    G         | | |                 T T
    C       A G A G
      T G A        G     TAGGTCGGTAACACGGCGC
                    C - G
                    G + T
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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