The detailed information of tRNA gene sequence


Sequence ID>W1710037839
Genome IDBAFN01000001
Search identical group
Phylum/ClassPlanctomycetota
SpeciesCandidatus Brocadia sinica sinica JPN1 [BAFN]
Start position on genome 221378
End posion on genome 221286
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cccaaagaat
tRNA gene sequence 
GGAGAGGTGGCTGAGTGGCTGAAAGCGACGGTTTGCTAAACCGTTGTAGAGACAAAATCT
CTACCCCGGGTTCGAATCCCGGCCTCTCCGCCA
Downstream region at tRNA end position 
tgtatctgta
Secondary structure (Cloverleaf model)
>W1710037839	Ser	GCT
                   t      GCCA tgtatctgta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G G C C C     A
      T G A        G      | | | | |     G
    G       G T C G       C C G G G     C
    G         | | |                 T T
    C       A A G C
      T G A        G     TGTAGAGACAAAATCTCTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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