The detailed information of tRNA gene sequence


Sequence ID>W1710041713
Genome IDBBAR01000015
Search identical group
Phylum/ClassBacillota
SpeciesLentilactobacillus parafarraginis DSM 18390 = JCM 14109 [BBAR]
Start position on genome 838
End posion on genome 925
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tgttacttat
tRNA gene sequence 
GGAGGATTACCCAAGTGGCTGAAGGGGGCGGTCTTGAAAACCGCTAGGTGGGTCAAACCA
CGCGAGAGTTCGAATCTCTCATCCTCCTtta
Downstream region at tRNA end position 
tattatcgcg
Secondary structure (Cloverleaf model)
>W1710041713	Ser	TGA
                   t      Ttta tattatcgcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C T C T C     A
      T G A        A      | | | | |     G
    G       A C C C       G A G A G     C
    G         | | |                 T T
    C       A G G G
      T G A        G     TAGGTGGGTCAAACCACGC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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