The detailed information of tRNA gene sequence


Sequence ID>W1710042180
Genome IDBBBL01000360
Search identical group
Phylum/ClassDeinococcota
SpeciesThermus kawarayensis JCM 12314 [BBBL]
Start position on genome 1440
End posion on genome 1516
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ccttcggcgt
tRNA gene sequence 
GGGCCGTTAGCTCAATCGGTGAGAGCGGCCGGCTCATAACCGGTTGGTTGCAGGTTCAAG
TCCTGCACGGCCCACCA
Downstream region at tRNA end position 
gaggccccct
Secondary structure (Cloverleaf model)
>W1710042180	Met	CAT
                   t      ACCA gaggccccct
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A          T G
                    T     C G T C C     A
      T A A        A      | | | | |     A
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T G A        G     TGGTT
                    G + T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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