The detailed information of tRNA gene sequence


Sequence ID>W1710042211
Genome IDBBBM01000021
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfothermus okinawensis JCM 13304 [BBBM]
Start position on genome 1532
End posion on genome 1606
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
catttccgcT
tRNA gene sequence 
AGGCGGATAGCTCAGTTGGGAGAGCATCGGCCTTACAAGCCGGGGGTCACAGGTTCGAGC
CCTGTTCCGCCCATgg
Downstream region at tRNA end position 
gagccgtagt
Secondary structure (Cloverleaf model)
>W1710042211	Val	TAC
                   T      ATgg gagccgtagt
                     A   C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     A - T          C G
                    T     T G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C A G G     C
    G       | | | |                 T T
    G       G A G C
      G A          A     GGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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