The detailed information of tRNA gene sequence


Sequence ID>W1710042224
Genome IDBBBM01000043
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfothermus okinawensis JCM 13304 [BBBM]
Start position on genome 10526
End posion on genome 10433
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tttgaaacaT
tRNA gene sequence 
GGAGAGGTGGCCGAGCTGGCTGAAGGCGCTCGCCTGCTAAGCGAGTATAGAGGCTAAAAC
CTCTATCGAGGGTTCAAATCCCTCCCTCTCCGTtt
Downstream region at tRNA end position 
taattgggtt
Secondary structure (Cloverleaf model)
>W1710042224	Ser	GCT
                   T      GTtt taattgggtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     A
  G         G C C G       G A G G G     C
  G           | | |                 T T
  C         A G G C
    T G A          G     TATAGAGGCTAAAACCTCTATC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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