The detailed information of tRNA gene sequence


Sequence ID>W1710043539
Genome IDBBCX01000004
Search identical group
Phylum/ClassNitrospirota
SpeciesThermodesulfovibrio aggregans JCM 13213 [BBCX]
Start position on genome 35458
End posion on genome 35361
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
catgttcatt
tRNA gene sequence 
GGGAGTGTATGGGGCTCTGGTGTCCCCCCTGGACTTCAAATCCAGTGTTGCCTGTGAGGA
GCGGGCAAGGTGGGTTCGATTCCCACACACTCCCGCCA
Downstream region at tRNA end position 
tcttttattt
Secondary structure (Cloverleaf model)
>W1710043539	SeC(p)	TCA
                   t      GCCA tcttttattt
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     T - A          T T
                    A     C A C C C     A
      C T C        T      | | | | |     G
    T       G G G G       G T G G G     C
    G       | | | |                 T T
    G       C C C C
      T G T        C     TGTTGCCTGTGAGGAGCGGGCAAG
                    C - G
                    T - A
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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