The detailed information of tRNA gene sequence


Sequence ID>W1710043958
Genome IDBBDF01000026
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermus marinus JCM 9785 [BBDF]
Start position on genome 5619
End posion on genome 5694
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
cgtatggggc
tRNA gene sequence 
GGGGTTATAGCTCAGTTGGTAGAGCGCCGGCTTTGCAAGCCGGAGGTCGTCGGTTCGAAT
CCGACTAACTCCACCA
Downstream region at tRNA end position 
cgcctccacc
Secondary structure (Cloverleaf model)
>W1710043958	Ala	TGC
                   c      ACCA cgcctccacc
                     G - C
                     G - C
                     G + T
                     G - C
                     T - A
                     T - A
                     A - T          T A
                    T     C A G C C     A
      T G A        A      | | | | |     G
    T       C T C G       G T C G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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