The detailed information of tRNA gene sequence


Sequence ID>W1710043962
Genome IDBBDF01000040
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermus marinus JCM 9785 [BBDF]
Start position on genome 681
End posion on genome 606
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
caggcaacgt
tRNA gene sequence 
GGGGACATAGCTCAGTTGGTAGAGCGCTGCGATCGCACCGCAGAGGTCAGGGGTTCGAAT
CCCCTTGTCTCCACAA
Downstream region at tRNA end position 
cagttgtgtc
Secondary structure (Cloverleaf model)
>W1710043962	Ala	CGC
                   t      ACAA cagttgtgtc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     C - G
                     A - T          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    G - C
                  A       C
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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