The detailed information of tRNA gene sequence


Sequence ID>W1710043978
Genome IDBBDF01000189
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermus marinus JCM 9785 [BBDF]
Start position on genome 2623
End posion on genome 2547
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aaaggcgtct
tRNA gene sequence 
GGCGCGGTAGCTCAGTCGGTTAGAGCGTCGGATTCATAACCCGGAGGTCGAGGGTTCGAA
TCCCTCCCGCGCCACCA
Downstream region at tRNA end position 
cgaaaagcgc
Secondary structure (Cloverleaf model)
>W1710043978	Met	CAT
                   t      ACCA cgaaaagcgc
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        A      | | | | |     G
    C       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    G - C
                    A   C
                  T       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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