The detailed information of tRNA gene sequence


Sequence ID>W1710043985
Genome IDBBDF01000347
Search identical group
Phylum/ClassRhodothermota
SpeciesRhodothermus marinus JCM 9785 [BBDF]
Start position on genome 2272
End posion on genome 2197
Amino Acid Glu
Anticodon TTC
Upstream region at tRNA start position 
ttgtgtacct
tRNA gene sequence 
GCCGCGTTCGTCTAGGGGTCTAGGACGCCGGTCTTTCAAGCCGGTAACACGGGTTCAAAT
CCCGTACGCGGCACAA
Downstream region at tRNA end position 
agcgcccgcc
Secondary structure (Cloverleaf model)
>W1710043985	Glu	TTC
                   t      ACAA agcgcccgcc
                     G - C
                     C - G
                     C - G
                     G - C
                     C - G
                     G - C
                     T - A          T A
                    T     T G C C C     A
      G G A        C      | | | | |     A
    G       T C T G       A C G G G     C
    G       + | | |                 T T
    T       G G A C
      C T A        G     TAAC
                    C - G
                    C - G
                    G - C
                    G - C
                    T + G
                  C       A
                  T       A
                    T T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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