The detailed information of tRNA gene sequence


Sequence ID>W1710060002
Genome IDBCNO01000001
Search identical group
Phylum/ClassNitrospirota
SpeciesThermodesulfovibrio aggregans [BCNO]
Start position on genome 1022539
End posion on genome 1022614
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gcataagaaT
tRNA gene sequence 
AGGCCAGTAGCTCTAACGGCTAGAGCACCGGACTCCAAATCCGGGGGTTGGGGGTTCGAA
TCCCTCCTGGCCTGTtc
Downstream region at tRNA end position 
gttatgtttt
Secondary structure (Cloverleaf model)
>W1710060002	Trp	CCA
                   T      GTtc gttatgtttt
                     A - T
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T
                     G - C          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C T A        A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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