The detailed information of tRNA gene sequence


Sequence ID>W1710060222
Genome IDBCNS01000218
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesMarinobacterium profundum PAMC 27536 [BCNS]
Start position on genome 6047
End posion on genome 6134
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
catacaatat
tRNA gene sequence 
GGTGAGGTGTCCGAGTGGCCGAAGGAGCACGCCTGGAAAGTGTGTATACCGCAAGGTATC
GAGGGTTCGAATCCCTCCCTCACCGCCA
Downstream region at tRNA end position 
tattcttaat
Secondary structure (Cloverleaf model)
>W1710060222	Ser	GGA
                   t      GCCA tattcttaat
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      T G A        G      | | | | |     G
    G       G C C T       G A G G G     C
    G         | | |                 T T
    C       A G G A
      C G A        G     TATACCGCAAGGTATC
                    C - G
                    A - T
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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