The detailed information of tRNA gene sequence


Sequence ID>W1710082049
Genome IDBDGP01000211
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesThaumasiovibrio occultus [BDGP]
Start position on genome 30160
End posion on genome 30068
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
taatttgtgt
tRNA gene sequence 
GGTGAGGTGGCCGAGAGGCTGAAGGCGCTCCCCTGCTAAGGGAGTATACGGCTTATACCC
GTATCGAGGGTTCGAATCCCTCCTTCACCGCCA
Downstream region at tRNA end position 
ttatttctcg
Secondary structure (Cloverleaf model)
>W1710082049	Ser	GCT
                   t      GCCA ttatttctcg
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     G + T
                     G - C          T A
                    T     C T C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G A G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TATACGGCTTATACCCGTATC
                    C - G
                    T - A
                    C - G
                    C - G
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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