The detailed information of tRNA gene sequence


Sequence ID>W1710090376
Genome IDCVPF01000160
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesThiocapsa sp. KS1 [CVPF]
Start position on genome 20353
End posion on genome 20277
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
agcatgattt
tRNA gene sequence 
CGGGGTGTAGCTCAGCTTGGTAGAGCGCTGTCTTCGGGAGGCAGAAGTCGCTGGTTCGAA
TCCAGTCACCCCGACCA
Downstream region at tRNA end position 
aatcagtatc
Secondary structure (Cloverleaf model)
>W1710090376	Pro	CGG
                   t      ACCA aatcagtatc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T A
                    T     T G A C C     A
      C G A        A      + | | | |     G
    T       C T C G       G C T G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AAGTC
                    C - G
                    T - A
                    G - C
                    T + G
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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