The detailed information of tRNA gene sequence


Sequence ID>W1710506987
Genome IDFMUX01000009
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesDesulfoluna spongiiphila [FMUX]
Start position on genome 166966
End posion on genome 166869
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgaaacgcat
tRNA gene sequence 
GGAAGCACGCAGCGTTCTGGTGATGCTCCCGGACTTCAAATCCGGTGTGGGGCGTTAACA
CCGTCCCGGGTGGGTTCGATTCCCATGTGCTTCCGCCA
Downstream region at tRNA end position 
tatatctaat
Secondary structure (Cloverleaf model)
>W1710506987	SeC(p)	TCA
                   t      GCCA tatatctaat
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     A - T
                     C - G          T T
                    G     T A C C C     A
      C T T        C      + | | | |     G
    T       G C G A       G T G G G     C
    G       + | | |                 T T
    G       T G C T
      T G A        C     TGTGGGGCGTTAACACCGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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