The detailed information of tRNA gene sequence


Sequence ID>W1710543545
Genome IDFOAB01000005
Search identical group
Phylum/ClassBacteroidota
SpeciesAquimarina amphilecti [FOAB]
Start position on genome 400559
End posion on genome 400470
Amino Acid Pseudo
Anticodon GCT
Upstream region at tRNA start position 
tcaactttaa
tRNA gene sequence 
GGAGAATAGGCAAATACTGGTTTGTTGCGCTTGTCTGCTAAACAAGTCTGCATGATTGCA
GTGAAGGTTCAATTCCTTTGTTCTCCGCAA
Downstream region at tRNA end position 
tattgatact
Secondary structure (Cloverleaf model)
>W1710543545	Pseudo	GCT
                   a      GCAA tattgatact
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     T + G          T T
                    A     T T T C C     A
    C A T A        G      + | | | |     A
  T         A A C G       G A A G G     C
  G         | | | |                 T T
  G         T T G C
    T T T G        G     TCTGCATGATTGCAGT
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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