The detailed information of tRNA gene sequence


Sequence ID>W1710544820
Genome IDFOBB01000004
Search identical group
Phylum/ClassBacteroidota
SpeciesChitinophaga rupis [FOBB]
Start position on genome 112194
End posion on genome 112109
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
cttttgcgcc
tRNA gene sequence 
GGAGGAATGGCAGAGCGGTCGATTGCGGCAGTCTTGAAAACTGTTGACTGTAACAGGTCC
GGGGGTTCGAATCCCTCTTCCTCCGCtc
Downstream region at tRNA end position 
aaataatttg
Secondary structure (Cloverleaf model)
>W1710544820	Ser	TGA
                   c      GCtc aaataatttg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACTGTAACAGGTCC
                    G + T
                    C - G
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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