The detailed information of tRNA gene sequence


Sequence ID>W1710550793
Genome IDFOFO01000019
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesEctothiorhodospira magna [FOFO]
Start position on genome 2064
End posion on genome 2138
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cttcgcattt
tRNA gene sequence 
GGGCGGTTAGCTCAGCGGTAGAGCACTGCCTTCACACGGCAGGGGTCAGTGGTTCGATCC
CACTACCGCCCACCA
Downstream region at tRNA end position 
aatttagcga
Secondary structure (Cloverleaf model)
>W1710550793	Val	CAC
                   t      ACCA aatttagcga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     T C A C C     A
        G A        A      | | | | |     G
      C     C T C G       A G T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     GGGTC
                    C - G
                    T - A
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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