The detailed information of tRNA gene sequence


Sequence ID>W1710559785
Genome IDFOMX01000005
Search identical group
Phylum/ClassMyxococcota
SpeciesNannocystis exedens [FOMX]
Start position on genome 9640
End posion on genome 9546
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
cctcgcccgc
tRNA gene sequence 
GGAGGCGCTCGGCTCGCTGGTGCGGCCCCCGGTCTTCAACACCGGAGTGGGGTGCGAGGA
GCGCCCTGGGCAGGTTCGATTCCTGTGCGCCTCCGatc
Downstream region at tRNA end position 
tcctcggcac
Secondary structure (Cloverleaf model)
>W1710559785	SeC	TCA
                   c      Gatc tcctcggcac
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G          T T
                    T     T G T C C     A
      C G C        C      + | | | |     G
    T       T C G G       G C A G G     C
    G       + | | |                 T T
    G       G G C C
      T G C        C     AGTGGGGTGCGAGGAGCGCCCTGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       C
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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