The detailed information of tRNA gene sequence


Sequence ID>W1710562109
Genome IDFOOS01000002
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesJannaschia rubra [FOOS]
Start position on genome 726920
End posion on genome 726996
Amino Acid Arg
Anticodon ACG
Upstream region at tRNA start position 
cccccgtagt
tRNA gene sequence 
GCGCTGGTAGCTCAGTTGGATAGAGTACTTGACTACGAATCAAGGGGTCGGGGGTTCGAA
TCCTCCCCAGCGCGCCA
Downstream region at tRNA end position 
acatctcctt
Secondary structure (Cloverleaf model)
>W1710562109	Arg	ACG
                   t      GCCA acatctcctt
                     G - C
                     C - G
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C          T A
                    T     C C T C C     A
      T G A        A      | | + | |     G
    T       C T C G       G G G G G     C
    G       | | | +                 T T
    G       G A G T
      A T A        A     GGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    A C G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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