The detailed information of tRNA gene sequence


Sequence ID>W1710562119
Genome IDFOOS01000003
Search identical group
Phylum/ClassAlphaproteobacteria
SpeciesJannaschia rubra [FOOS]
Start position on genome 292893
End posion on genome 292817
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
cggcattcgt
tRNA gene sequence 
CGGGGCGTGGCGCAGTCTGGTAGCGCACCTGTTTTGGGTACAGGGGGTCGGAAGTTCGAA
TCTTCTCGCCCCGACCA
Downstream region at tRNA end position 
tgtgacggcc
Secondary structure (Cloverleaf model)
>W1710562119	Pro	TGG
                   t      ACCA tgtgacggcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T T C     A
      T G A        G      + | | | |     G
    C       C G C G       G G A A G     C
    T       | | | |                 T T
    G       G C G C
      G T A        A     GGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  T       T
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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