The detailed information of tRNA gene sequence


Sequence ID>W1710564236
Genome IDFOQI01000017
Search identical group
Phylum/ClassBetaproteobacteria
SpeciesCollimonas sp. OK307 [FOQI]
Start position on genome 111999
End posion on genome 111909
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
tgtagttgca
tRNA gene sequence 
GGAGAGATGGATGAGTGGTTGAAGTCGCACGCCTGGAAAGCGTGTATAGGTTCATAGCCT
ATCCGGGGTTCGAATCCCCGTCTCTCCGCCA
Downstream region at tRNA end position 
ggaacatgtt
Secondary structure (Cloverleaf model)
>W1710564236	Ser	GGA
                   a      GCCA ggaacatgtt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     G C C C C     A
      T G A        G      | | | | |     G
    G       G T A G       C G G G G     C
    G         + | |                 T T
    T       A G T C
      T G A        G     TATAGGTTCATAGCCTATC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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