The detailed information of tRNA gene sequence


Sequence ID>W1710564819
Genome IDFOQT01000001
Search identical group
Phylum/ClassBacteroidota
SpeciesHalpernia frigidisoli [FOQT]
Start position on genome 156316
End posion on genome 156229
Amino Acid Pseudo
Anticodon TGA
Upstream region at tRNA start position 
acgtttttat
tRNA gene sequence 
GGAGAGCTGGCAGAGTGGTCGATTGCGATAGTCTTGAAAACTATTGACTGTAACAGGTCC
TGGGGTTCGAATCCCTAGCTCTCCGCAA
Downstream region at tRNA end position 
aaatcctcaa
Secondary structure (Cloverleaf model)
>W1710564819	Pseudo	TGA
                   t      GCAA aaatcctcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     C - G          T A
                    T     A T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       T G G G G     C
    G       + | | |                 T T
    T       T T G C
      C G A        G     TGACTGTAACAGGTCC
                    A - T
                    T - A
                    A - T
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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