The detailed information of tRNA gene sequence


Sequence ID>W1710587637
Genome IDFQYR01000003
Search identical group
Phylum/ClassVerrucomicrobiota
SpeciesRubritalea squalenifaciens DSM 18772 [FQYR]
Start position on genome 1085380
End posion on genome 1085304
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
attcctagtt
tRNA gene sequence 
CGGGGCGTAGCGCAGCTTGGTAGCGCGTTTCACTGGGGGTGAAGAGGTCGCAGGTTCAAA
TCCTGTCGTCCCGACCA
Downstream region at tRNA end position 
ttaggaatcc
Secondary structure (Cloverleaf model)
>W1710587637	Pro	GGG
                   t      ACCA ttaggaatcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C G C G       G C A G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    T + G
                    T - A
                    T - A
                    C - G
                    A - T
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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