The detailed information of tRNA gene sequence


Sequence ID>W1710594451
Genome IDFSRG01000003
Search identical group
Phylum/ClassThermodesulfobacteriota
SpeciesHalodesulfovibrio marinisediminis DSM 17456 [FSRG]
Start position on genome 60656
End posion on genome 60563
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atctacaaaa
tRNA gene sequence 
GGAAGCGTTTCGTCACCGGTGTGGCGTCCGGTCTTCAAAACCGGTGTAGGGCAGTGATGT
CCTAGGTAGGTTCGACTCCTATACGCTTCCGCCA
Downstream region at tRNA end position 
tcgaacttac
Secondary structure (Cloverleaf model)
>W1710594451	SeC(p)	TCA
                   a      GCCA tcgaacttac
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     C - G
                     G - C
                     T - A          T C
                    T     T A T C C     A
      C C A        T      + | | | |     G
    G       C T G C       G T A G G     C
    G       | + | |                 T T
    T       G G C G
      G T          T     TGTAGGGCAGTGATGTCCTAG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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