The detailed information of tRNA gene sequence


Sequence ID>W1710600219
Genome IDFUWG01000006
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema porcinum [FUWG]
Start position on genome 81956
End posion on genome 82030
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
aaaaatataT
tRNA gene sequence 
AGGGCAGTAGTTCAGCTGGTAGAGCAGCGGTCTCCAAAACCGCCTGTCGTGGGTTCAAAT
CCTGCCTGCCCTGTtt
Downstream region at tRNA end position 
tcagttaatc
Secondary structure (Cloverleaf model)
>W1710600219	Trp	CCA
                   T      GTtt tcagttaatc
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     G - C          T A
                    T     C G T C C     A
      C G A        A      | + + | |     A
    T       C T T G       G T G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     CTGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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