The detailed information of tRNA gene sequence


Sequence ID>W1710600221
Genome IDFUWG01000007
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema porcinum [FUWG]
Start position on genome 59012
End posion on genome 59086
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
aacatcactT
tRNA gene sequence 
GGGGACCTAGCTCAGTCGGTAGAGCATACGGCTCATATCCGTAGTGTCATAGGTTCAATC
CCTATGGTCCCTAGaa
Downstream region at tRNA end position 
agcttgcata
Secondary structure (Cloverleaf model)
>W1710600221	Met	CAT
                   T      AGaa agcttgcata
                     G + T
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     C - G          C T
                    T     T A T C C     A
      T G A        A      | | | | |     A
    C       C T C G       A T A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GTGTC
                    T - A
                    A - T
                    C - G
                    G - C
                    G - C
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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