The detailed information of tRNA gene sequence


Sequence ID>W1710600231
Genome IDFUWG01000010
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema porcinum [FUWG]
Start position on genome 55328
End posion on genome 55246
Amino Acid Leu
Anticodon CAA
Upstream region at tRNA start position 
tttcacgtac
tRNA gene sequence 
GCCGGAGTGGTGGAATGGTAGACACGAAAGACTCAAAATCTTTTGCGGGCGACTGCGTAA
GAGTTCAAGTCTCTTCTCCGGTAtag
Downstream region at tRNA end position 
gcggttcttt
Secondary structure (Cloverleaf model)
>W1710600231	Leu	CAA
                   c      Atag gcggttcttt
                     G + T
                     C - G
                     C - G
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T T C T C     A
      T A A        G      | | | | |     A
    G       G G T G       A A G A G     C
    G         | | |                 T T
    T       A C A C
      A G          G     TGCGGGCGACTGCGT
                    A - T
                    A - T
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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