The detailed information of tRNA gene sequence


Sequence ID>W1710601213
Genome IDFUXC01000001
Search identical group
Phylum/ClassSpirochaetota
SpeciesTreponema berlinense [FUXC]
Start position on genome 101789
End posion on genome 101716
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
acaatcactt
tRNA gene sequence 
GGGGGCATAGTCCAGCTGGTAGAACACCGGACTCATATTCCGTATGTCATAGGTTCAAGT
CCTATTGCCCCTACtt
Downstream region at tRNA end position 
ttttcaaggg
Secondary structure (Cloverleaf model)
>W1710601213	Met	CAT
                   t      ACtt ttttcaaggg
                     G + T
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T          T G
                    T     T A T C C     A
      C G A        A      | | | | |     A
    T       C C T G       A T A G G     C
    G       |   | |                 T T
    G       G A A C
      T A          A     ATGTC
                    C   T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       T
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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