The detailed information of tRNA gene sequence


Sequence ID>W1710610054
Genome IDFYEK01000003
Search identical group
Phylum/ClassChloroflexota
SpeciesThermoflexus hugenholtzii JAD2 [FYEK]
Start position on genome 41569
End posion on genome 41662
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
atccctctct
tRNA gene sequence 
GGGGGCGGTTGGCCTCTGGTGAGGCCCCCGGTCTTCAAAACCGGTGTCGGGCCGCGGCGC
GGCCCGGGGTGGGTTCGATTCCCATCCGCTCCCGtgg
Downstream region at tRNA end position 
ccggtgtgct
Secondary structure (Cloverleaf model)
>W1710610054	SeC(p)	TCA
                   t      Gtgg ccggtgtgct
                     G - C
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     G - C
                     G - C          T T
                    T     T A C C C     A
      T C T        T      + | | | |     G
    G       C C G G       G T G G G     C
    G       | | | |                 T T
    T       G G C C
      G A          C     TGTCGGGCCGCGGCGCGGCCCGGG
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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