The detailed information of tRNA gene sequence


Sequence ID>W1710652112
Genome IDJWSX01001980
Search identical group
Phylum/ClassChloroflexota
SpeciesLitorilinea aerophila [JWSX]
Start position on genome 2459
End posion on genome 2369
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
atcgatacac
tRNA gene sequence 
GGAGAGGTCGCATAGTCTGGCCGAGTGCGCGGGCCTGGAAAGCTCGTAGGGTTAACAGCC
CTCGAGGGTTCAAATCCCTCCCTCTCCGCCT
Downstream region at tRNA end position 
tttttgtcct
Secondary structure (Cloverleaf model)
>W1710652112	Ser	GGA
                   c      GCCT tttttgtcct
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    C T G A        C      | | | | |     A
  T         T A C G       G A G G G     C
  G         + | | |                 T T
  G         G T G C
    C C G A        G     TAGGGTTAACAGCCCTC
                    C - G
                    G - C
                    G + T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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