The detailed information of tRNA gene sequence


Sequence ID>W133000935
Genome IDALVJ01000037
Search identical group
Phylum/ClassCyanobacteriota
SpeciesCalothrix sp. PCC 7103 [ALVJ]
Start position on genome 150632
End posion on genome 150557
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggtaaattat
tRNA gene sequence 
GGCAGTGTAACCTAATTGTTAAGGTCGCCATCTCATAAGTGGTTTAATGCGGGTTAAAAT
CCCGCCACTGCTACCA
Downstream region at tRNA end position 
aatgcagcga
Secondary structure (Cloverleaf model)
>W133000935	Met	CAT
                   t      ACCA aatgcagcga
                     G + T
                     G - C
                     C - G
                     A - T
                     G - C
                     T - A
                     G - C          T A
                    T     C G C C C     A
      T A A        A      | | | | |     A
    T       T C C A       G C G G G     A
    G       | | | |                 T T
    T       A G G T
      T A          C     TTAAT
                    G + T
                    C - G
                    C - G
                    A - T
                    T + G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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