The detailed information of tRNA gene sequence


Sequence ID>W1710656252
Genome IDJXGD01000348
Search identical group
Phylum/ClassGammaproteobacteria
SpeciesXanthomonas oryzae pv. oryzae [JXGD]
Start position on genome 2889
End posion on genome 2799
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gggaccatct
tRNA gene sequence 
GGAGAGGTGGCAGAGCGGTTGAATGTACCTGACTCGAAATCAGGCAGGCGTTTATAGCGC
CTCGGGGGTTCGAATCCCCCCCTCTCCGCCA
Downstream region at tRNA end position 
aatgacgcaa
Secondary structure (Cloverleaf model)
>W1710656252	Ser	CGA
                   t      GCCA aatgacgcaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | +                 T T
    T       A T G T
      T G A        A     CAGGCGTTTATAGCGCCTC
                    C - G
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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