The detailed information of tRNA gene sequence


Sequence ID>W133003040
Genome IDAQSQ01000019
Search identical group
Phylum/ClassCaldisericota
SpeciesCaldiserica bacterium JGI 0000059-M03 [AQSQ]
Start position on genome 16815
End posion on genome 16908
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaaaactttt
tRNA gene sequence 
GGAGAGGTGGCCGAGAGGCTGAAGGCACTCGCCTGGAAAGCGAGTAGACGGGAGTAAACT
TGTCTCGCGGGTCCGAATCCCGCCCTCTCCGCCA
Downstream region at tRNA end position 
ggtgaattaa
Secondary structure (Cloverleaf model)
>W133003040	Ser	GGA
                   t      GCCA ggtgaattaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C G C C C     A
      A G A        G      | | | | |     G
    G       G C C G       G C G G G     C
    G         | | |                 T C
    C       A G G C
      T G A        A     TAGACGGGAGTAAACTTGTCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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